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1 to 10 of 23 Results
Inter-Nucleosomal Potentials from Nucleosomal Positioning Data [Research Data]
Mar 29, 2022
Li, Kunhe; Oiwa, Nestor N.; Mishra, Sujeet K.; Heermann, Dieter W., 2022, "Inter-Nucleosomal Potentials from Nucleosomal Positioning Data [Research Data]", https://doi.org/10.11588/data/H3KPEU, heiDATA, V1
This dataset accompanies the paper "Inter-Nucleosomal Potentials from Nucleosomal Positioning Data." In this paper, a systematic method to develop inter-nucleosomal potentials between nucleosomes along a chromosome is focused. To this purpose, a modified Lennard-Jones potential i...
compress01_100000.out
Mar 29, 2022 - Inter-Nucleosomal Potentials from Nucleosomal Positioning Data [Research Data]
Unknown - 6.3 KB - MD5: 0ce938f78da55b4a458c89a83d0eb8e9
ICPC-source.tar.gz
Mar 29, 2022 - Inter-Nucleosomal Potentials from Nucleosomal Positioning Data [Research Data]
Gzip Archive - 133.2 KB - MD5: 2f875aa8fc446ff03ff3bb72c364cd63
Potential01_100000.like_bed
Mar 29, 2022 - Inter-Nucleosomal Potentials from Nucleosomal Positioning Data [Research Data]
Unknown - 24.8 KB - MD5: 72cfde8af53c6e2e72e5a2169ee62ac9
Prediction and Comparative Analysis of CTCF Binding Sites based on a First Principle Approach [Research Data]
Mar 7, 2022
Li, Kunhe; Oiwa, Nestor Norio; Cordeiro, Claudette E.; Heermann, Dieter W., 2022, "Prediction and Comparative Analysis of CTCF Binding Sites based on a First Principle Approach [Research Data]", https://doi.org/10.11588/data/RDISCE, heiDATA, V1
The file contains the CTCF-DNA binding sites for complete genome of Homo sapiens (human), Mus musculus (mouse), Sus scrofa (pig), Capra hircus (goat), Aedes aegypti (dengue and yellow fever mosquito) and Drosophila melanogaster (fruit fly) using electronic nucleotide alignment. T...
CTCFbinding.zip
Mar 7, 2022 - Prediction and Comparative Analysis of CTCF Binding Sites based on a First Principle Approach [Research Data]
ZIP Archive - 5.2 MB - MD5: 11f881d7d0d1576fbe2f2ce4a4839da9
Bekvaem: Integrative Data Exploration of Genomic Data
Nov 21, 2019
Hofmann, Andreas; Müggenburg, Jan; Heermann, Dieter W., 2019, "Bekvaem: Integrative Data Exploration of Genomic Data", https://doi.org/10.11588/data/KGYOS6, heiDATA, V1
Using modern open-source libraries for web-based visualizations and data-processing, Bekvaem, a generic framework for the creation of data exploration software is introduced. Providing a high-level interface to fast low-level routines and employing open formats for the data stora...
Bekvaem_01.zip
Nov 21, 2019 - Bekvaem: Integrative Data Exploration of Genomic Data
ZIP Archive - 4.1 MB - MD5: cd784de2ce933fdca7b827294a316256
Code
Software, Version 0.1
Bekvaem_02.zip
Nov 21, 2019 - Bekvaem: Integrative Data Exploration of Genomic Data
ZIP Archive - 23.3 MB - MD5: f9807b245c1b4499be03becdeef1e927
Code
Software, Version 0.2
Bekvaem_03.zip
Nov 21, 2019 - Bekvaem: Integrative Data Exploration of Genomic Data
ZIP Archive - 56.8 MB - MD5: f13b96883ca27ed02acf1d4f1c31073c
Code
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