Statistical Genetics

Data publications from the Statistical Genetics Group at Heidelberg University's Institute of Medical Biometry and Informatics.

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51 to 60 of 72 Results

CB105ANXX_SR1412_18s000902-1-1_Ibberson_lane8TGBC2_2_sequence.txt.gz Oct 22, 2018 - RNA Sequence Data for Hepatobiliary Cancer Cell Lines Gzip Archive - 2.4 GB - MD5: fc4740f81c3ec0e0d53b6ee01e0b5f6d
mutation_profiles.xlsx Oct 22, 2018 - RNA Sequence Data for Hepatobiliary Cancer Cell Lines MS Excel Spreadsheet - 999.3 KB - MD5: 2657dbec27ccc0f44e4f73cf926a1b8a
normalized_data_counts.txt Oct 22, 2018 - RNA Sequence Data for Hepatobiliary Cancer Cell Lines Plain Text - 14.1 MB - MD5: f26268836b80ccf568f06b96632f12c6
Imputation of Missing Genotypes within LD-Blocks Relying on the Basic Coalescent and Beyond [Source Code] Oct 15, 2018 Kabisch, Maria; Hamann, Ute; Lorenzo Bermejo, Justo, 2018, "Imputation of Missing Genotypes within LD-Blocks Relying on the Basic Coalescent and Beyond [Source Code]", https://doi.org/10.11588/data/X9UEHB, heiDATA, V1 Background Genotypes not directly measured in genetic studies are often imputed to improve statistical power and to increase mapping resolution. The accuracy of standard imputation techniques strongly depends on the similarity of linkage disequilibrium (LD) patterns in the study...
01_import_fromMSMS_export_toBATWING.sas Oct 15, 2018 - Imputation of Missing Genotypes within LD-Blocks Relying on the Basic Coalescent and Beyond [Source Code] SAS Syntax - 11.3 KB - MD5: b9783281bb992778400d95cf36e072bf Code
02_import_fromBATWING_export_toSumTrees.sas Oct 15, 2018 - Imputation of Missing Genotypes within LD-Blocks Relying on the Basic Coalescent and Beyond [Source Code] SAS Syntax - 2.6 KB - MD5: 2ce2d0ed405d3dc908a03be27a838a1d Code
03_imputation_accuracy.sas Oct 15, 2018 - Imputation of Missing Genotypes within LD-Blocks Relying on the Basic Coalescent and Beyond [Source Code] SAS Syntax - 17.9 KB - MD5: 1f43b2e6248d3962c00c8ca6afd02e95 Code
04_import_fromVCF_export_toSHAPEIT.sas Oct 15, 2018 - Imputation of Missing Genotypes within LD-Blocks Relying on the Basic Coalescent and Beyond [Source Code] SAS Syntax - 2.1 KB - MD5: b2a6f72c38af639e2b5c4bf14ac30ac1 Code
05_import_SHAPEIT_export_toGENETREE.sas Oct 15, 2018 - Imputation of Missing Genotypes within LD-Blocks Relying on the Basic Coalescent and Beyond [Source Code] SAS Syntax - 5.2 KB - MD5: a895bbc36dce79e41dbcae0162f2a4b9 Code
Source_Code_Imputation_of_Missing_Genotypes_within_LD-Blocks_Relying_on_the_Basic_Coalescent_and_Beyond.pdf Oct 15, 2018 - Imputation of Missing Genotypes within LD-Blocks Relying on the Basic Coalescent and Beyond [Source Code] Adobe PDF - 238.4 KB - MD5: cf5718a7f3d66bff3ef5670d8eeff55f Code Source code and documentation for 5 SAS programs

CB105ANXX_SR1412_18s000902-1-1_Ibberson_lane8TGBC2_2_sequence.txt.gz

Oct 22, 2018 - RNA Sequence Data for Hepatobiliary Cancer Cell Lines

Gzip Archive - 2.4 GB -

mutation_profiles.xlsx

Oct 22, 2018 - RNA Sequence Data for Hepatobiliary Cancer Cell Lines

MS Excel Spreadsheet - 999.3 KB -

normalized_data_counts.txt

Oct 22, 2018 - RNA Sequence Data for Hepatobiliary Cancer Cell Lines

Plain Text - 14.1 MB -

Imputation of Missing Genotypes within LD-Blocks Relying on the Basic Coalescent and Beyond [Source Code]

Oct 15, 2018

Kabisch, Maria; Hamann, Ute; Lorenzo Bermejo, Justo, 2018, "Imputation of Missing Genotypes within LD-Blocks Relying on the Basic Coalescent and Beyond [Source Code]", https://doi.org/10.11588/data/X9UEHB, heiDATA, V1

Background Genotypes not directly measured in genetic studies are often imputed to improve statistical power and to increase mapping resolution. The accuracy of standard imputation techniques strongly depends on the similarity of linkage disequilibrium (LD) patterns in the study...

01_import_fromMSMS_export_toBATWING.sas

Oct 15, 2018 - Imputation of Missing Genotypes within LD-Blocks Relying on the Basic Coalescent and Beyond [Source Code]

SAS Syntax - 11.3 KB -

Code

02_import_fromBATWING_export_toSumTrees.sas

Oct 15, 2018 - Imputation of Missing Genotypes within LD-Blocks Relying on the Basic Coalescent and Beyond [Source Code]

SAS Syntax - 2.6 KB -

Code

03_imputation_accuracy.sas

Oct 15, 2018 - Imputation of Missing Genotypes within LD-Blocks Relying on the Basic Coalescent and Beyond [Source Code]

SAS Syntax - 17.9 KB -

Code