Data publications from the Statistical Genetics Group at Heidelberg University's Institute of Medical Biometry and Informatics.
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11 to 20 of 72 Results
step1.r
Oct 15, 2018 - Tailored Selection of Study Individuals to be Sequenced in Order to Improve the Accuracy of Genotype Imputation [Source Code]
R Syntax - 4.4 KB - MD5: eba2c2916f84dabe389bae2a455dbcbd
Code
step5.r
Oct 15, 2018 - Tailored Selection of Study Individuals to be Sequenced in Order to Improve the Accuracy of Genotype Imputation [Source Code]
R Syntax - 1.7 KB - MD5: c1422a5107ff0e5dd33b042cf3c71c61
Code
Imputation of Missing Genotypes within LD-Blocks Relying on the Basic Coalescent and Beyond [Source Code]
Imputation of Missing Genotypes within LD-Blocks Relying on the Basic Coalescent and Beyond [Source Code]
Oct 15, 2018
Kabisch, Maria; Hamann, Ute; Lorenzo Bermejo, Justo, 2018, "Imputation of Missing Genotypes within LD-Blocks Relying on the Basic Coalescent and Beyond [Source Code]", https://doi.org/10.11588/data/X9UEHB, heiDATA, V1
Background Genotypes not directly measured in genetic studies are often imputed to improve statistical power and to increase mapping resolution. The accuracy of standard imputation techniques strongly depends on the similarity of linkage disequilibrium (LD) patterns in the study...
01_import_fromMSMS_export_toBATWING.sas
Oct 15, 2018 - Imputation of Missing Genotypes within LD-Blocks Relying on the Basic Coalescent and Beyond [Source Code]
SAS Syntax - 11.3 KB - MD5: b9783281bb992778400d95cf36e072bf
Code
02_import_fromBATWING_export_toSumTrees.sas
Oct 15, 2018 - Imputation of Missing Genotypes within LD-Blocks Relying on the Basic Coalescent and Beyond [Source Code]
SAS Syntax - 2.6 KB - MD5: 2ce2d0ed405d3dc908a03be27a838a1d
Code
03_imputation_accuracy.sas
Oct 15, 2018 - Imputation of Missing Genotypes within LD-Blocks Relying on the Basic Coalescent and Beyond [Source Code]
SAS Syntax - 17.9 KB - MD5: 1f43b2e6248d3962c00c8ca6afd02e95
Code
04_import_fromVCF_export_toSHAPEIT.sas
Oct 15, 2018 - Imputation of Missing Genotypes within LD-Blocks Relying on the Basic Coalescent and Beyond [Source Code]
SAS Syntax - 2.1 KB - MD5: b2a6f72c38af639e2b5c4bf14ac30ac1
Code
05_import_SHAPEIT_export_toGENETREE.sas
Oct 15, 2018 - Imputation of Missing Genotypes within LD-Blocks Relying on the Basic Coalescent and Beyond [Source Code]
SAS Syntax - 5.2 KB - MD5: a895bbc36dce79e41dbcae0162f2a4b9
Code
Source_Code_Imputation_of_Missing_Genotypes_within_LD-Blocks_Relying_on_the_Basic_Coalescent_and_Beyond.pdf
Source_Code_Imputation_of_Missing_Genotypes_within_LD-Blocks_Relying_on_the_Basic_Coalescent_and_Beyond.pdf
Oct 15, 2018 - Imputation of Missing Genotypes within LD-Blocks Relying on the Basic Coalescent and Beyond [Source Code]
Adobe PDF - 238.4 KB - MD5: cf5718a7f3d66bff3ef5670d8eeff55f
Code
Source code and documentation for 5 SAS programs
RNA Sequence Data for Hepatobiliary Cancer Cell Lines
Oct 22, 2018
Lorenzo Bermejo, Justo et al., 2018, "RNA Sequence Data for Hepatobiliary Cancer Cell Lines", https://doi.org/10.11588/data/SCGJHQ, heiDATA, V1
RNA Sequence Data for Hepatobiliary Cancer Cell Lines
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