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Mar 29, 2022 - Theoretical Physics
Li, Kunhe; Oiwa, Nestor N.; Mishra, Sujeet K.; Heermann, Dieter W., 2022, "Inter-Nucleosomal Potentials from Nucleosomal Positioning Data [Research Data]", https://doi.org/10.11588/data/H3KPEU, heiDATA, V1
This dataset accompanies the paper "Inter-Nucleosomal Potentials from Nucleosomal Positioning Data." In this paper, a systematic method to develop inter-nucleosomal potentials between nucleosomes along a chromosome is focused. To this purpose, a modified Lennard-Jones potential i...
Mar 7, 2022 - Theoretical Physics
Li, Kunhe; Oiwa, Nestor Norio; Cordeiro, Claudette E.; Heermann, Dieter W., 2022, "Prediction and Comparative Analysis of CTCF Binding Sites based on a First Principle Approach [Research Data]", https://doi.org/10.11588/data/RDISCE, heiDATA, V1
The file contains the CTCF-DNA binding sites for complete genome of Homo sapiens (human), Mus musculus (mouse), Sus scrofa (pig), Capra hircus (goat), Aedes aegypti (dengue and yellow fever mosquito) and Drosophila melanogaster (fruit fly) using electronic nucleotide alignment. T...
Feb 28, 2022 - Göpfrich Group - Biophysical Engineering of Life
Goepfrich, Kerstin; Walther, Tobias, 2022, "Printing and Erasing of DNA-based Photoresists inside Synthetic Cells [RESEARCH DATA]", https://doi.org/10.11588/data/MKOC9S, heiDATA, V1
In the pursuit to produce functioning synthetic cells from the bottom up, DNA nanotechnology has proven to be a powerful tool. However, the crowded yet highly organized arrangement in living cells, bridging from the nano- to the micron-scale, remains challenging to recreate with...
Feb 3, 2022 - Synthetic Quantum Systems (SynQS)
Riechert, Hannes; Halimeh, Jad C.; Kasper, Valentin; Bretheau, Landry; Zohar, Erez; Hauke, Philipp; Jendrzejewski, Fred, 2022, "Engineering a U(1) lattice gauge theory in classical electric circuits [Research Data and Code]", https://doi.org/10.11588/data/6MEKHI, heiDATA, V1
Abstract: Lattice gauge theories are fundamental to such distinct fields as particle physics, condensed matter, and quantum information science. Their local symmetries enforce the charge conservation observed in the laws of physics. Impressive experimental progress has demonstrat...
Jan 24, 2022 - CryoEM
Köntges, Wolfgang; Perkhun, Pavlo; Kammerer, Jochen; Alkarsifi, Riva; Würfel, Uli; Margeat, Olivier; Videlot-Ackermann, Christine; Simon, Jean-Jacques; Schröder, Rasmus R.; Ackermann, Jörg; Pfannmöller, Martin, 2022, "Visualizing morphological principles for efficient photocurrent generation in organic non-fullerene acceptor blends [Research data]", https://doi.org/10.11588/data/ZW8JL9, heiDATA, V1
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