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KnopLab (University of Heidelberg - Center for Molecular Biology of Heidelberg University (ZMBH))
Data publications of the KnopLab.
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1 to 10 of 60 Results
May 28, 2019
Buchmuller, Benjamin C; Herbst, Konrad; Meurer, Matthias; Kirrmaier, Daniel; Sass, Ehud; Levy, Emmanuel D; Knop, Michael, 2019, "Pooled clone collections by multiplexed CRISPR-Cas12a-assisted gene tagging in yeast [Dataset]", https://doi.org/10.11588/data/L45TRX, heiDATA, V2
Data accompanying the paper "Pooled clone collections by multiplexed CRISPR-Cas12a-assisted gene tagging in yeast" by Buchmuller and Herbst et al, 2019, Nat Communications. This contains raw NGS data for all genotyping analysis in the publication as well as the source code of the...
ZIP Archive - 400.6 MB - MD5: 3dea41c60cc5128ff329f060016efafb
multiplexed TruSeq amplicon sequencing of PCR and RCA for libraries 1a, 1b, 2a, 2b, 3a, 3b, 4a, 4b (only R2 was used for analysis)
Plain Text - 1.7 KB - MD5: 0446e5ba5ca91f2f210532504522b0c2
Documentation
description of raw sequencing data (individual .zip files)
ZIP Archive - 1.5 GB - MD5: f592aecd0da42ac255c68b265f7d7d23
TruSeq amplicon sequencing of 1x sampled PCR
ZIP Archive - 4.4 GB - MD5: 8774a245382e5e5f581caa50710e5cfa
TruSeq amplicon sequencing of 10x sampled PCR
ZIP Archive - 1.0 GB - MD5: 1d3daf8b760c59380e0b9c74c2f2f4b2
TruSeq amplicon sequencing of RCA
ZIP Archive - 9.1 GB - MD5: 44cce7e24c8ebc9d46885ce9001207ef
multiplexed Anchor-Seq (CDS-tag junction) of libraries (#1.1, #1.2, #1.3), one unspecified lib (data not shown) and the FACS enriched (1st FACS) lib #1.1
ZIP Archive - 318.4 MB - MD5: 74bf918f119e661d9e219b8934d9aa8f
multiplexed Anchor-Seq (CDS-tag junction) of FACS binning (2nd FACS) of FACS enriched (1st FACS) lib #1.1
ZIP Archive - 11.2 GB - MD5: 4871aad2440a255205b5001efe1951d3
multiplexed Anchor-Seq (tag-3'UTR junction) of libraries 1a, 1b, 2a, 2b, 3a, 3b, 4a, 4b
ZIP Archive - 16.2 GB - MD5: fd4ca043907e92b44840374ca7e9ba6e
multiplexed Anchor-Seq (tag-3'UTR junction) of libraries LibA, LibB, LibC (in contrast to LibA and LibB, LibC was sequenced in the same run as libraries 1a-4b)
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