Data publications of the KnopLab.
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1 to 10 of 60 Results
CASTLING_rawdata_201704-illumina_poolC_PCR.zip
May 16, 2019 - Pooled clone collections by multiplexed CRISPR-Cas12a-assisted gene tagging in yeast [Dataset]
ZIP Archive - 1.5 GB - MD5: f592aecd0da42ac255c68b265f7d7d23
TruSeq amplicon sequencing of 1x sampled PCR
CASTLING_rawdata_201706-illumina_poolC_PCR.zip
May 16, 2019 - Pooled clone collections by multiplexed CRISPR-Cas12a-assisted gene tagging in yeast [Dataset]
ZIP Archive - 4.4 GB - MD5: 8774a245382e5e5f581caa50710e5cfa
TruSeq amplicon sequencing of 10x sampled PCR
CASTLING_rawdata_201706-illumina_poolC_RCA.zip
May 16, 2019 - Pooled clone collections by multiplexed CRISPR-Cas12a-assisted gene tagging in yeast [Dataset]
ZIP Archive - 1.0 GB - MD5: 1d3daf8b760c59380e0b9c74c2f2f4b2
TruSeq amplicon sequencing of RCA
CASTLING_rawdata_201708-illumina_poolC_libs.zip
May 16, 2019 - Pooled clone collections by multiplexed CRISPR-Cas12a-assisted gene tagging in yeast [Dataset]
ZIP Archive - 9.1 GB - MD5: 44cce7e24c8ebc9d46885ce9001207ef
multiplexed Anchor-Seq (CDS-tag junction) of libraries (#1.1, #1.2, #1.3), one unspecified lib (data not shown) and the FACS enriched (1st FACS) lib #1.1
CASTLING_rawdata_201709-minion_poolC_libs_mNeonGreen_phenobins.zip
May 16, 2019 - Pooled clone collections by multiplexed CRISPR-Cas12a-assisted gene tagging in yeast [Dataset]
ZIP Archive - 318.4 MB - MD5: 74bf918f119e661d9e219b8934d9aa8f
multiplexed Anchor-Seq (CDS-tag junction) of FACS binning (2nd FACS) of FACS enriched (1st FACS) lib #1.1
CASTLING_rawdata_201805-illumina_poolAB1B2_PCR_RCA.zip
May 28, 2019 - Pooled clone collections by multiplexed CRISPR-Cas12a-assisted gene tagging in yeast [Dataset]
ZIP Archive - 400.6 MB - MD5: 3dea41c60cc5128ff329f060016efafb
multiplexed TruSeq amplicon sequencing of PCR and RCA for libraries 1a, 1b, 2a, 2b, 3a, 3b, 4a, 4b (only R2 was used for analysis)
CASTLING_rawdata_201806-illumina_poolAB1B2_libs.zip
May 16, 2019 - Pooled clone collections by multiplexed CRISPR-Cas12a-assisted gene tagging in yeast [Dataset]
ZIP Archive - 11.2 GB - MD5: 4871aad2440a255205b5001efe1951d3
multiplexed Anchor-Seq (tag-3'UTR junction) of libraries 1a, 1b, 2a, 2b, 3a, 3b, 4a, 4b
CASTLING_rawdata_201806-illumina_poolD_libs.zip
May 16, 2019 - Pooled clone collections by multiplexed CRISPR-Cas12a-assisted gene tagging in yeast [Dataset]
ZIP Archive - 16.2 GB - MD5: fd4ca043907e92b44840374ca7e9ba6e
multiplexed Anchor-Seq (tag-3'UTR junction) of libraries LibA, LibB, LibC (in contrast to LibA and LibB, LibC was sequenced in the same run as libraries 1a-4b)
castR-1.0.zip
May 16, 2019 - Pooled clone collections by multiplexed CRISPR-Cas12a-assisted gene tagging in yeast [Dataset]
ZIP Archive - 21.8 KB - MD5: a9c5aad3287a8addab810ca1676d2573
Sourcecode Designsoftware of Pooled Genome-Wide Tag Libraries v1.0 (also https://github.com/knoplab/castR/tree/v1.0)
facs_noise_functions.R
May 18, 2016 - Protein abundance control by non-coding antisense transcription [Dataset]
Plain Text - 6.4 KB - MD5: 6f27cc37be4c3cb3ff3b71e8921d4b11
Flow cytometry data for noise measurements
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