3D Matter Made to Order (3DMM2O)

Data publications from the Cluster of Excellence 3D Matter Made to Order (3DMM2O). The Cluster is a collaboration of Karlsruhe Institute of Technology (KIT) and Heidelberg University. It pursues an interdisciplinary approach through conjunction of natural, engineering, and social sciences. 3DMM2O establishes scalable digital 3D Additive Manufacturing transcending from the molecular to the macroscopic scale. The goal is the ultimate digitalization of 3D manufacturing and material processing.

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1 to 10 of 28 Results

Stabilizing γ-MgH₂ at Nanotwins in Mechanically Constrained Nanoparticles [Research Data and Source Code] Jan 27, 2021 - CryoEM Kammerer, Jochen A.; Duan, Xiaoyang; Neubrech, Frank; Schröder, Rasmus R.; Liu, Na; Pfannmöller, Martin, 2021, "Stabilizing γ-MgH₂ at Nanotwins in Mechanically Constrained Nanoparticles [Research Data and Source Code]", https://doi.org/10.11588/data/LMMXAI, heiDATA, V1 Research Data and Source Code associated with the related publication.
Fish primary embryonic pluripotent cells assemble into retinal tissue mirroring in vivo early eye development - in vivo imaging of OV formation Jul 6, 2021 - AG Wittbrodt Zilova, Lucie; Weinhardt, Venera; Tavhelidse, Tinatini; Schlagheck, Christina; Thumberger, Thomas; Wittbrodt, Joachim, 2021, "Fish primary embryonic pluripotent cells assemble into retinal tissue mirroring in vivo early eye development - in vivo imaging of OV formation", https://doi.org/10.11588/data/AOSUS8, heiDATA, V1 Development of a functional retina is accompanied by several morphological events transitions that ultimately result in the formation of a functional retina. One of them is the formation of the OV. When fish-derived organoids were generated with reduced cell-seeding density by 50...
Dual kinetic and structural role for the surface in guiding SAS-6 self-assembly to direct centriole architecture [Data] Sep 23, 2021 de Buhr, Svenja; Gräter, Frauke, 2021, "Dual kinetic and structural role for the surface in guiding SAS-6 self-assembly to direct centriole architecture [Data]", https://doi.org/10.11588/data/3NKHAY, heiDATA, V1 This dataset contains input structures and parameters for coarse-grained molecular dynamics simulation of SAS-6 protein oligomers as well as post-processing files and analysis scripts. Abstract of related publication: Discovering mechanisms governing organelle assembly is a funda...
Two-Photon 3D Laser Printing Inside Synthetic Cells [Research Data] Nov 30, 2021 - Göpfrich Group - Biophysical Engineering of Life Abele, Tobias; Messer, Tobias; Jahnke, Kevin; Hippler, Marc; Bastmeyer, Martin; Wegener, Martin; Goepfrich, Kerstin, 2021, "Two-Photon 3D Laser Printing Inside Synthetic Cells [Research Data]", https://doi.org/10.11588/data/PUKJCV, heiDATA, V1 Towards the ambitious goal of manufacturing synthetic cells from the bottom up, various cellular components have already been reconstituted inside of lipid vesicles. However, the deterministic positioning of these components inside the compartment has remained elusive. Here, by u...
Vegetable Oils as Sustainable Inks for Additive Manufacturing: A Comparative Study [Data] Dec 15, 2021 - Blasco Group Vazquez-Martel, Clara; Becker, Lukas; Liebig, Wilfried V.; Elsner, Peter; Blasco, Eva, 2021, "Vegetable Oils as Sustainable Inks for Additive Manufacturing: A Comparative Study [Data]", https://doi.org/10.11588/data/7NFYJ0, heiDATA, V1 The use of biobased materials in additive manufacturing is arising as a promising approach to modernize the polymer industry reducing its environmental impact. Herein, novel sustainable formulations are developed for digital light processing (DLP) using five vegetable oils─sunflo...
Soluble Congeners of Prior Insoluble Shape‐Persistent Imine Cages [Data] Jan 17, 2022 - Institute of Organic Chemistry - AK Mastalerz Holsten, Mattes; Feierabend, Sarah; Elbert, Sven M.; Rominger, Frank; Oeser, Thomas; Mastalerz, Michael, 2022, "Soluble Congeners of Prior Insoluble Shape‐Persistent Imine Cages [Data]", https://doi.org/10.11588/data/E2RPGA, heiDATA, V1 One of the most applied reaction types to synthesize shape‐persistent organic cage compounds is the imine condensation reaction and it is assumed that the formed cages are thermodynamically controlled products due to the reversibility of the imine condensation. However, most of t...
A Triptycene-Based Enantiopure Bis(Diazadibenzoanthracene) by a Chirality-Assisted Synthesis Approach [Data] Jan 19, 2022 - Institute of Organic Chemistry - AK Mastalerz Wang, Xubin; Kohl, Bernd; Rominger, Frank; Elbert, Sven Michael; Mastalerz, Michael, 2022, "A Triptycene-Based Enantiopure Bis(Diazadibenzoanthracene) by a Chirality-Assisted Synthesis Approach [Data]", https://doi.org/10.11588/data/46LINE, heiDATA, V1 By applying a chirality-assisted synthesis (CAS)approach enantiopure diaminodibromotriptycenes were converted to rigid chiral helical diazadibenzoanthracenes, which show besides pronounced Cotton effects in circular dichroism spectra higher photoluminescence quantum yields as com...
A Hexagonal Shape-Persistent Nanobelt of Elongated Rhombic Symmetry with Orthogonal π-Planes by a One-Pot Reaction [Data] Jan 19, 2022 - Institute of Organic Chemistry - AK Mastalerz Lauer, Jochen C.; Kohl, Bernd; Rominger, Frank; Mastalerz, Michael, 2022, "A Hexagonal Shape-Persistent Nanobelt of Elongated Rhombic Symmetry with Orthogonal π-Planes by a One-Pot Reaction [Data]", https://doi.org/10.11588/data/EBY4AN, heiDATA, V1 Triptycenes with their predefined D3h-symmetry are excellent molecular building blocks to construct shape-persistent nanobelts having π-orbitals orthogonal to the ring plane. However, up to now, there are only a very few examples of fused and rigid iptycene nanobelts synthesized...
Switchable Zinc (II)-Responsive Globular β-Sheet Peptide [Research Data] Jan 19, 2022 - Thomas Lab Pham, Truc Lam; Kovermann, Michael; Thomas, Franziska, 2022, "Switchable Zinc (II)-Responsive Globular β-Sheet Peptide [Research Data]", https://doi.org/10.11588/data/HV4MJW, heiDATA, V1 The natural function of many proteins depends on their ability to switch their conformation driven by environmental changes. In this work, we present a small, monomeric β-sheet peptide that switches between a molten globule and a folded state through Zn(II) binding. The solvent-e...
Synthesis of Large [2+3] Salicylimine Cages with Embedded Metal-Salphen Units [Data] Jan 24, 2022 - Institute of Organic Chemistry - AK Mastalerz Uhrmacher, Fabian; Elbert, Sven Michael; Rominger, Frank; Mastalerz, Michael, 2022, "Synthesis of Large [2+3] Salicylimine Cages with Embedded Metal-Salphen Units [Data]", https://doi.org/10.11588/data/LOR2JH, heiDATA, V1 Shape-persistent trinuclear Ni(II)- and Pt(II)-cage compounds with large cavities have been synthesized by using bissalicylaldehyde struts that contain the metal salphen units already. The Pt(II) derivative was investigated by single crystal X-ray diffraction.

Stabilizing γ-MgH₂ at Nanotwins in Mechanically Constrained Nanoparticles [Research Data and Source Code]

Jan 27, 2021 - CryoEM

Kammerer, Jochen A.; Duan, Xiaoyang; Neubrech, Frank; Schröder, Rasmus R.; Liu, Na; Pfannmöller, Martin, 2021, "Stabilizing γ-MgH₂ at Nanotwins in Mechanically Constrained Nanoparticles [Research Data and Source Code]", https://doi.org/10.11588/data/LMMXAI, heiDATA, V1

Research Data and Source Code associated with the related publication.

Fish primary embryonic pluripotent cells assemble into retinal tissue mirroring in vivo early eye development - in vivo imaging of OV formation

Jul 6, 2021 - AG Wittbrodt

Zilova, Lucie; Weinhardt, Venera; Tavhelidse, Tinatini; Schlagheck, Christina; Thumberger, Thomas; Wittbrodt, Joachim, 2021, "Fish primary embryonic pluripotent cells assemble into retinal tissue mirroring in vivo early eye development - in vivo imaging of OV formation", https://doi.org/10.11588/data/AOSUS8, heiDATA, V1

Development of a functional retina is accompanied by several morphological events transitions that ultimately result in the formation of a functional retina. One of them is the formation of the OV. When fish-derived organoids were generated with reduced cell-seeding density by 50...

Dual kinetic and structural role for the surface in guiding SAS-6 self-assembly to direct centriole architecture [Data]

Sep 23, 2021

de Buhr, Svenja; Gräter, Frauke, 2021, "Dual kinetic and structural role for the surface in guiding SAS-6 self-assembly to direct centriole architecture [Data]", https://doi.org/10.11588/data/3NKHAY, heiDATA, V1

This dataset contains input structures and parameters for coarse-grained molecular dynamics simulation of SAS-6 protein oligomers as well as post-processing files and analysis scripts. Abstract of related publication: Discovering mechanisms governing organelle assembly is a funda...

Two-Photon 3D Laser Printing Inside Synthetic Cells [Research Data]

Nov 30, 2021 - Göpfrich Group - Biophysical Engineering of Life

Abele, Tobias; Messer, Tobias; Jahnke, Kevin; Hippler, Marc; Bastmeyer, Martin; Wegener, Martin; Goepfrich, Kerstin, 2021, "Two-Photon 3D Laser Printing Inside Synthetic Cells [Research Data]", https://doi.org/10.11588/data/PUKJCV, heiDATA, V1

Towards the ambitious goal of manufacturing synthetic cells from the bottom up, various cellular components have already been reconstituted inside of lipid vesicles. However, the deterministic positioning of these components inside the compartment has remained elusive. Here, by u...

Vegetable Oils as Sustainable Inks for Additive Manufacturing: A Comparative Study [Data]

Dec 15, 2021 - Blasco Group

Vazquez-Martel, Clara; Becker, Lukas; Liebig, Wilfried V.; Elsner, Peter; Blasco, Eva, 2021, "Vegetable Oils as Sustainable Inks for Additive Manufacturing: A Comparative Study [Data]", https://doi.org/10.11588/data/7NFYJ0, heiDATA, V1

The use of biobased materials in additive manufacturing is arising as a promising approach to modernize the polymer industry reducing its environmental impact. Herein, novel sustainable formulations are developed for digital light processing (DLP) using five vegetable oils─sunflo...

Soluble Congeners of Prior Insoluble Shape‐Persistent Imine Cages [Data]

Jan 17, 2022 - Institute of Organic Chemistry - AK Mastalerz

Holsten, Mattes; Feierabend, Sarah; Elbert, Sven M.; Rominger, Frank; Oeser, Thomas; Mastalerz, Michael, 2022, "Soluble Congeners of Prior Insoluble Shape‐Persistent Imine Cages [Data]", https://doi.org/10.11588/data/E2RPGA, heiDATA, V1

One of the most applied reaction types to synthesize shape‐persistent organic cage compounds is the imine condensation reaction and it is assumed that the formed cages are thermodynamically controlled products due to the reversibility of the imine condensation. However, most of t...

A Triptycene-Based Enantiopure Bis(Diazadibenzoanthracene) by a Chirality-Assisted Synthesis Approach [Data]

Jan 19, 2022 - Institute of Organic Chemistry - AK Mastalerz

Wang, Xubin; Kohl, Bernd; Rominger, Frank; Elbert, Sven Michael; Mastalerz, Michael, 2022, "A Triptycene-Based Enantiopure Bis(Diazadibenzoanthracene) by a Chirality-Assisted Synthesis Approach [Data]", https://doi.org/10.11588/data/46LINE, heiDATA, V1

By applying a chirality-assisted synthesis (CAS)approach enantiopure diaminodibromotriptycenes were converted to rigid chiral helical diazadibenzoanthracenes, which show besides pronounced Cotton effects in circular dichroism spectra higher photoluminescence quantum yields as com...

A Hexagonal Shape-Persistent Nanobelt of Elongated Rhombic Symmetry with Orthogonal π-Planes by a One-Pot Reaction [Data]

Jan 19, 2022 - Institute of Organic Chemistry - AK Mastalerz

Lauer, Jochen C.; Kohl, Bernd; Rominger, Frank; Mastalerz, Michael, 2022, "A Hexagonal Shape-Persistent Nanobelt of Elongated Rhombic Symmetry with Orthogonal π-Planes by a One-Pot Reaction [Data]", https://doi.org/10.11588/data/EBY4AN, heiDATA, V1

Triptycenes with their predefined D3h-symmetry are excellent molecular building blocks to construct shape-persistent nanobelts having π-orbitals orthogonal to the ring plane. However, up to now, there are only a very few examples of fused and rigid iptycene nanobelts synthesized...

Switchable Zinc (II)-Responsive Globular β-Sheet Peptide [Research Data]

Jan 19, 2022 - Thomas Lab

Pham, Truc Lam; Kovermann, Michael; Thomas, Franziska, 2022, "Switchable Zinc (II)-Responsive Globular β-Sheet Peptide [Research Data]", https://doi.org/10.11588/data/HV4MJW, heiDATA, V1

The natural function of many proteins depends on their ability to switch their conformation driven by environmental changes. In this work, we present a small, monomeric β-sheet peptide that switches between a molten globule and a folded state through Zn(II) binding. The solvent-e...

Synthesis of Large [2+3] Salicylimine Cages with Embedded Metal-Salphen Units [Data]

Jan 24, 2022 - Institute of Organic Chemistry - AK Mastalerz

Uhrmacher, Fabian; Elbert, Sven Michael; Rominger, Frank; Mastalerz, Michael, 2022, "Synthesis of Large [2+3] Salicylimine Cages with Embedded Metal-Salphen Units [Data]", https://doi.org/10.11588/data/LOR2JH, heiDATA, V1

Shape-persistent trinuclear Ni(II)- and Pt(II)-cage compounds with large cavities have been synthesized by using bissalicylaldehyde struts that contain the metal salphen units already. The Pt(II) derivative was investigated by single crystal X-ray diffraction.

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