3D Matter Made to Order (3DMM2O)

Data publications from the Cluster of Excellence 3D Matter Made to Order (3DMM2O). The Cluster is a collaboration of Karlsruhe Institute of Technology (KIT) and Heidelberg University. It pursues an interdisciplinary approach through conjunction of natural, engineering, and social sciences. 3DMM2O establishes scalable digital 3D Additive Manufacturing transcending from the molecular to the macroscopic scale. The goal is the ultimate digitalization of 3D manufacturing and material processing.

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1 to 10 of 28 Results

Visualizing morphological principles for efficient photocurrent generation in organic non-fullerene acceptor blends [Research data] Jan 24, 2022 - CryoEM Köntges, Wolfgang; Perkhun, Pavlo; Kammerer, Jochen; Alkarsifi, Riva; Würfel, Uli; Margeat, Olivier; Videlot-Ackermann, Christine; Simon, Jean-Jacques; Schröder, Rasmus R.; Ackermann, Jörg; Pfannmöller, Martin, 2022, "Visualizing morphological principles for efficient photocurrent generation in organic non-fullerene acceptor blends [Research data]", https://doi.org/10.11588/data/ZW8JL9, heiDATA, V1 Research Data associated with the related publication.
Vegetable Oils as Sustainable Inks for Additive Manufacturing: A Comparative Study [Data] Dec 15, 2021 - Blasco Group Vazquez-Martel, Clara; Becker, Lukas; Liebig, Wilfried V.; Elsner, Peter; Blasco, Eva, 2021, "Vegetable Oils as Sustainable Inks for Additive Manufacturing: A Comparative Study [Data]", https://doi.org/10.11588/data/7NFYJ0, heiDATA, V1 The use of biobased materials in additive manufacturing is arising as a promising approach to modernize the polymer industry reducing its environmental impact. Herein, novel sustainable formulations are developed for digital light processing (DLP) using five vegetable oils─sunflo...
Two-Photon 3D Laser Printing Inside Synthetic Cells [Research Data] Nov 30, 2021 - Göpfrich Group - Biophysical Engineering of Life Abele, Tobias; Messer, Tobias; Jahnke, Kevin; Hippler, Marc; Bastmeyer, Martin; Wegener, Martin; Goepfrich, Kerstin, 2021, "Two-Photon 3D Laser Printing Inside Synthetic Cells [Research Data]", https://doi.org/10.11588/data/PUKJCV, heiDATA, V1 Towards the ambitious goal of manufacturing synthetic cells from the bottom up, various cellular components have already been reconstituted inside of lipid vesicles. However, the deterministic positioning of these components inside the compartment has remained elusive. Here, by u...
Triggered contraction of self-assembled micron-scale DNA nanotube rings [Research Data] Feb 16, 2024 - Göpfrich Group - Biophysical Engineering of Life Illig, Maja; Jahnke, Kevin; Weise, Lukas P.; Scheffold, Marlene; Mersdorf, Ulrike; Drechsler, Hauke; Zhang, Yixin; Diez, Stefan; Kierfeld, Jan; Göpfrich, Kerstin, 2024, "Triggered contraction of self-assembled micron-scale DNA nanotube rings [Research Data]", https://doi.org/10.11588/data/ADYUNN, heiDATA, V1, UNF:6:AJdXI51lTUqvs4V/XCVPZQ== [fileUNF] Contractile rings formed from cytoskeletal filaments mediate the division of cells. Ring formation is induced by specific crosslinkers, while contraction is typically associated with motor protein activity. Here, we engineer DNA nanotubes as mimics of cytoskeletal filaments and a...
The CSY-protecting group in the microwave-assisted synthesis of aggregation-prone peptides [Research Data] Mar 24, 2022 - Thomas Lab Pham, Truc Lam; Zilke, Jennifer; Müller, Christine Charlotte; Thomas, Franziska, 2022, "The CSY-protecting group in the microwave-assisted synthesis of aggregation-prone peptides [Research Data]", https://doi.org/10.11588/data/ECKCUY, heiDATA, V1 This report describes the application of cyanosulfurylide (CSY)-protected aspartatic acid building blocks in microwave-assisted synthesis of aggregation-prone protein domains. We present a synthesis of Fmoc-Asp(CSY)-OH on a multigram scale, as well as procedures for the microwave...
Synthesis of Large [2+3] Salicylimine Cages with Embedded Metal-Salphen Units [Data] Jan 24, 2022 - Institute of Organic Chemistry - AK Mastalerz Uhrmacher, Fabian; Elbert, Sven Michael; Rominger, Frank; Mastalerz, Michael, 2022, "Synthesis of Large [2+3] Salicylimine Cages with Embedded Metal-Salphen Units [Data]", https://doi.org/10.11588/data/LOR2JH, heiDATA, V1 Shape-persistent trinuclear Ni(II)- and Pt(II)-cage compounds with large cavities have been synthesized by using bissalicylaldehyde struts that contain the metal salphen units already. The Pt(II) derivative was investigated by single crystal X-ray diffraction.
Switchable Zinc (II)-Responsive Globular β-Sheet Peptide [Research Data] Jan 19, 2022 - Thomas Lab Pham, Truc Lam; Kovermann, Michael; Thomas, Franziska, 2022, "Switchable Zinc (II)-Responsive Globular β-Sheet Peptide [Research Data]", https://doi.org/10.11588/data/HV4MJW, heiDATA, V1 The natural function of many proteins depends on their ability to switch their conformation driven by environmental changes. In this work, we present a small, monomeric β-sheet peptide that switches between a molten globule and a folded state through Zn(II) binding. The solvent-e...
Stabilizing γ-MgH₂ at Nanotwins in Mechanically Constrained Nanoparticles [Research Data and Source Code] Jan 27, 2021 - CryoEM Kammerer, Jochen A.; Duan, Xiaoyang; Neubrech, Frank; Schröder, Rasmus R.; Liu, Na; Pfannmöller, Martin, 2021, "Stabilizing γ-MgH₂ at Nanotwins in Mechanically Constrained Nanoparticles [Research Data and Source Code]", https://doi.org/10.11588/data/LMMXAI, heiDATA, V1 Research Data and Source Code associated with the related publication.
Soluble Congeners of Prior Insoluble Shape‐Persistent Imine Cages [Data] Jan 17, 2022 - Institute of Organic Chemistry - AK Mastalerz Holsten, Mattes; Feierabend, Sarah; Elbert, Sven M.; Rominger, Frank; Oeser, Thomas; Mastalerz, Michael, 2022, "Soluble Congeners of Prior Insoluble Shape‐Persistent Imine Cages [Data]", https://doi.org/10.11588/data/E2RPGA, heiDATA, V1 One of the most applied reaction types to synthesize shape‐persistent organic cage compounds is the imine condensation reaction and it is assumed that the formed cages are thermodynamically controlled products due to the reversibility of the imine condensation. However, most of t...
Relationship of Thermostability and Binding Affinity in Metal-binding WW-Domain Minireceptors [Research Data] Feb 9, 2024 - Thomas Lab Pham, Truc Lam; Conde González, Marcos Rafael; Fazliev, Sunnatullo; Kishore, Agi; Comba, Peter; Thomas, Franziska, 2024, "Relationship of Thermostability and Binding Affinity in Metal-binding WW-Domain Minireceptors [Research Data]", https://doi.org/10.11588/data/QSJTR0, heiDATA, V1 The design of metallo-miniproteins advances our understanding of the structural and functional roles of metals in proteins. We recently designed a metal-binding WW domain, WW-CA-Nle, which displays three histidine residues on its surface for coordination of divalent metals Ni(II)...

Visualizing morphological principles for efficient photocurrent generation in organic non-fullerene acceptor blends [Research data]

Jan 24, 2022 - CryoEM

Köntges, Wolfgang; Perkhun, Pavlo; Kammerer, Jochen; Alkarsifi, Riva; Würfel, Uli; Margeat, Olivier; Videlot-Ackermann, Christine; Simon, Jean-Jacques; Schröder, Rasmus R.; Ackermann, Jörg; Pfannmöller, Martin, 2022, "Visualizing morphological principles for efficient photocurrent generation in organic non-fullerene acceptor blends [Research data]", https://doi.org/10.11588/data/ZW8JL9, heiDATA, V1

Research Data associated with the related publication.

Vegetable Oils as Sustainable Inks for Additive Manufacturing: A Comparative Study [Data]

Dec 15, 2021 - Blasco Group

Vazquez-Martel, Clara; Becker, Lukas; Liebig, Wilfried V.; Elsner, Peter; Blasco, Eva, 2021, "Vegetable Oils as Sustainable Inks for Additive Manufacturing: A Comparative Study [Data]", https://doi.org/10.11588/data/7NFYJ0, heiDATA, V1

The use of biobased materials in additive manufacturing is arising as a promising approach to modernize the polymer industry reducing its environmental impact. Herein, novel sustainable formulations are developed for digital light processing (DLP) using five vegetable oils─sunflo...

Two-Photon 3D Laser Printing Inside Synthetic Cells [Research Data]

Nov 30, 2021 - Göpfrich Group - Biophysical Engineering of Life

Abele, Tobias; Messer, Tobias; Jahnke, Kevin; Hippler, Marc; Bastmeyer, Martin; Wegener, Martin; Goepfrich, Kerstin, 2021, "Two-Photon 3D Laser Printing Inside Synthetic Cells [Research Data]", https://doi.org/10.11588/data/PUKJCV, heiDATA, V1

Towards the ambitious goal of manufacturing synthetic cells from the bottom up, various cellular components have already been reconstituted inside of lipid vesicles. However, the deterministic positioning of these components inside the compartment has remained elusive. Here, by u...

Triggered contraction of self-assembled micron-scale DNA nanotube rings [Research Data]

Feb 16, 2024 - Göpfrich Group - Biophysical Engineering of Life

Illig, Maja; Jahnke, Kevin; Weise, Lukas P.; Scheffold, Marlene; Mersdorf, Ulrike; Drechsler, Hauke; Zhang, Yixin; Diez, Stefan; Kierfeld, Jan; Göpfrich, Kerstin, 2024, "Triggered contraction of self-assembled micron-scale DNA nanotube rings [Research Data]", https://doi.org/10.11588/data/ADYUNN, heiDATA, V1, UNF:6:AJdXI51lTUqvs4V/XCVPZQ== [fileUNF]

Contractile rings formed from cytoskeletal filaments mediate the division of cells. Ring formation is induced by specific crosslinkers, while contraction is typically associated with motor protein activity. Here, we engineer DNA nanotubes as mimics of cytoskeletal filaments and a...

The CSY-protecting group in the microwave-assisted synthesis of aggregation-prone peptides [Research Data]

Mar 24, 2022 - Thomas Lab

Pham, Truc Lam; Zilke, Jennifer; Müller, Christine Charlotte; Thomas, Franziska, 2022, "The CSY-protecting group in the microwave-assisted synthesis of aggregation-prone peptides [Research Data]", https://doi.org/10.11588/data/ECKCUY, heiDATA, V1

This report describes the application of cyanosulfurylide (CSY)-protected aspartatic acid building blocks in microwave-assisted synthesis of aggregation-prone protein domains. We present a synthesis of Fmoc-Asp(CSY)-OH on a multigram scale, as well as procedures for the microwave...

Synthesis of Large [2+3] Salicylimine Cages with Embedded Metal-Salphen Units [Data]

Jan 24, 2022 - Institute of Organic Chemistry - AK Mastalerz

Uhrmacher, Fabian; Elbert, Sven Michael; Rominger, Frank; Mastalerz, Michael, 2022, "Synthesis of Large [2+3] Salicylimine Cages with Embedded Metal-Salphen Units [Data]", https://doi.org/10.11588/data/LOR2JH, heiDATA, V1

Shape-persistent trinuclear Ni(II)- and Pt(II)-cage compounds with large cavities have been synthesized by using bissalicylaldehyde struts that contain the metal salphen units already. The Pt(II) derivative was investigated by single crystal X-ray diffraction.

Switchable Zinc (II)-Responsive Globular β-Sheet Peptide [Research Data]

Jan 19, 2022 - Thomas Lab

Pham, Truc Lam; Kovermann, Michael; Thomas, Franziska, 2022, "Switchable Zinc (II)-Responsive Globular β-Sheet Peptide [Research Data]", https://doi.org/10.11588/data/HV4MJW, heiDATA, V1

The natural function of many proteins depends on their ability to switch their conformation driven by environmental changes. In this work, we present a small, monomeric β-sheet peptide that switches between a molten globule and a folded state through Zn(II) binding. The solvent-e...

Stabilizing γ-MgH₂ at Nanotwins in Mechanically Constrained Nanoparticles [Research Data and Source Code]

Jan 27, 2021 - CryoEM

Kammerer, Jochen A.; Duan, Xiaoyang; Neubrech, Frank; Schröder, Rasmus R.; Liu, Na; Pfannmöller, Martin, 2021, "Stabilizing γ-MgH₂ at Nanotwins in Mechanically Constrained Nanoparticles [Research Data and Source Code]", https://doi.org/10.11588/data/LMMXAI, heiDATA, V1

Research Data and Source Code associated with the related publication.

Soluble Congeners of Prior Insoluble Shape‐Persistent Imine Cages [Data]

Jan 17, 2022 - Institute of Organic Chemistry - AK Mastalerz

Holsten, Mattes; Feierabend, Sarah; Elbert, Sven M.; Rominger, Frank; Oeser, Thomas; Mastalerz, Michael, 2022, "Soluble Congeners of Prior Insoluble Shape‐Persistent Imine Cages [Data]", https://doi.org/10.11588/data/E2RPGA, heiDATA, V1

One of the most applied reaction types to synthesize shape‐persistent organic cage compounds is the imine condensation reaction and it is assumed that the formed cages are thermodynamically controlled products due to the reversibility of the imine condensation. However, most of t...

Relationship of Thermostability and Binding Affinity in Metal-binding WW-Domain Minireceptors [Research Data]

Feb 9, 2024 - Thomas Lab

Pham, Truc Lam; Conde González, Marcos Rafael; Fazliev, Sunnatullo; Kishore, Agi; Comba, Peter; Thomas, Franziska, 2024, "Relationship of Thermostability and Binding Affinity in Metal-binding WW-Domain Minireceptors [Research Data]", https://doi.org/10.11588/data/QSJTR0, heiDATA, V1

The design of metallo-miniproteins advances our understanding of the structural and functional roles of metals in proteins. We recently designed a metal-binding WW domain, WW-CA-Nle, which displays three histidine residues on its surface for coordination of divalent metals Ni(II)...

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